Author

Asma Bankapur

Broad Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:simulation· 1 Research Focus:software / tool· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Alexander DobiniD· 1 shared Aviv RegeviD· 1 shared Bo LiiD· 1 shared Brian J. HaasiD· 1 shared Carrie L. GanoteiD· 1 shared Catherine J. WuiD· 1 shared Jing Yi SuniD· 1 shared Nathalie L.M.M. PochetiD· 1 shared

Activity by Year

2017-2017 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Alexander DobinORCID

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1 paper

Recent·Most cited

STAR-Fusion: Fast and Accurate Fusion Transcript Detection from RNA-Seq

Brian J. Haas, Alexander Dobin, Nicolas Stransky, Bo Li, Xiao Feng Yang, Timothy L. Tickle, Asma Bankapur, Carrie L. Ganote, Thomas G. Doak, Nathalie L.M.M. Pochet, Jing Yi Sun, Catherine J. Wu, T Gingeras, Aviv Regev

Filtering STAR's chimeric alignments against gene annotations outscored 15 other fusion callers on 60 cancer cell lines and ran fastest, averaging 2.3 single-core hours per sample.

bioRxiv · Mar 24, 2017 · PreprintBioinformatics✦ In-depth digest