Author

Beri Shifaw

Broad Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:fine-mapping· 1 Research Focus:GWAS / association mapping· 1 Organism:human· 1 Assay:long-read sequencing· 1 Approach:statistical model· 1

Frequent Co-Authors

Adam C. EnglishiD· 1 shared Allison N. RozanskiiD· 1 shared Anjene Musick AddingtoniD· 1 shared Chelsea Berngruber· 1 shared Chia‐Lin WeiiD· 1 shared David Roazen· 1 shared Donna Marie MuznyiD· 1 shared Elizabeth A. KiernaniD· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperGenetic & Genomic Medicine

Adam C. EnglishORCID

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2 papers

Recent·Most cited

Population-scale Long-read Sequencing in the All of Us Research Program

Kiran V. Garimella, Qiuhui Li, Julie Wertz, Samuel K. Lee, Fabio Cunial, Yongqing Huang, Yulia Mostovoy, Ryan Lorig-Roach, Adam C. English, Hang Su, Shawn A. Levy, Donna Marie Muzny, Chelsea Berngruber, Matt Christopher Danzi, William T. Harvey, , Evan E. Eichler

The paper analyzes long-read sequencing data from the All of Us Research Program to identify structural variants and their associations with diseases in a large cohort of Black or African American participants.

medRxiv · Oct 2, 2025 · PreprintGenetic & Genomic Medicine

Deploying genomics workflows on high performance computing (HPC) platforms: storage, memory, and compute considerations

Marissa E. Powers, Keith Mannthey, Priyanka Sebastian, Snehal Adsule, Elizabeth A. Kiernan, Jonathan T. Smith, Jessica Way, Beri Shifaw, David Roazen, Paolo Narvaez

This paper provides infrastructure recommendations for optimizing genomics workflows on HPC platforms through benchmarking and profiling.

bioRxiv · Apr 5, 2022 · PreprintBioinformatics