Validation of an optimised Oxford Nanopore sequencing workflow versus Illumina for mycobacteria from primary MGIT culture
Catriona S Baker, Matthew Colpus, Jessica Gentry, A. N. Hall, Eloïse Roghi, Hermione J. Webster, Bronte Drummond, Ruth Cooper, Hong Thi Cam Thai, Jeremy Westhead, Robert Turner, Tim Peto, Philip William Fowler, Marcus Morgan, Derrick W. Crook
This study validates an optimized Oxford Nanopore sequencing workflow for mycobacteria from primary MGIT cultures, showing high concordance with Illumina for species identification and SNP detection.
bioRxiv · May 8, 2026 · PreprintMolecular Biology