Author

Eloïse Roghi

University of OxfordORCID 0009-0005-9225-5602Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Organism:human· 1

Frequent Co-Authors

A. N. HalliD· 2 shared Catriona S BakeriD· 2 shared Derrick W. CrookiD· 2 shared Hermione J. WebsteriD· 2 shared Hong Thi Cam ThaiiD· 2 shared Jeremy WestheadiD· 2 shared Matthew ColpusiD· 2 shared Philip William FowleriD· 2 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersMolecular Biology

A. N. HallORCID

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2 papers

Recent·Most cited

Molecular BiologybioRxivPreprintMay 8, 2026

Validation of an optimised Oxford Nanopore sequencing workflow versus Illumina for mycobacteria from primary MGIT culture

Catriona S Baker, Matthew Colpus, Jessica Gentry…·Derrick W. Crook

This study validates an optimized Oxford Nanopore sequencing workflow for mycobacteria from primary MGIT cultures, showing high concordance with Illumina for species identification and SNP detection.

DOI 10.64898/2026.02.04.703726

whole-genome sequencingexperimental assay

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MicrobiologybioRxivPreprintApr 8, 2026

Long-read sequencing of Mycobacterial tuberculosis is comparable to short-read sequencing for antimicrobial resistance prediction and epidemiological studies.

Matthew Colpus, Catriona S Baker, Eloïse Roghi…·Derrick W. Crook

This study compares long-read and short-read sequencing for tuberculosis drug resistance and outbreak analysis, finding they are comparable with minimal differences in key clinical outputs.

1 citation

humanwhole-genome sequencing

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