Author

Chuan-Yu Hsu

Mississippi State University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 4

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 4 Approach:statistical model· 3 Research Focus:variant calling· 3 Research Focus:genome assembly· 2 Organism:plant (other)· 2 Approach:experimental assay· 1 Organism:zebrafish· 1

Frequent Co-Authors

Corrinne E. GroveriD· 4 shared Daniel G. PetersoniD· 4 shared Mark A. ArickiD· 4 shared Olga Pechanova· 3 shared Zenaida V. MagbanuaiD· 3 shared Adam ThrashiD· 2 shared Clifford W. MordeniD· 2 shared Ehsan KayaliD· 2 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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4 shared papersGenomics

Corrinne E. GroverORCID

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4 papers

Recent·Most cited

Population Genomics Informs Conservation Strategies for Critically Endangered Kokia Species in Hawaii

Weixuan Ning, Ehsan Kayal, Jonathan F. Wendel, Chuan-Yu Hsu, Zenaida V. Magbanua, Olga Pechanova, Mitsuko Yorkston, Clifford W. Morden, Matthew J. Keir, Joshua R. VanDeMark, Daniel G. Peterson, Mark A. Arick, Corrinne E. Grover

This study uses population genomics to assess genetic diversity and structure in three critically endangered Kokia species in Hawaii, informing conservation strategies.

bioRxiv · Jul 17, 2025 · PreprintGenomics

Genomic diversity and evolution in the Hawaiian Islands endemic Kokia (Malvaceae)

Ehsan Kayal, Mark A. Arick, Chuan-Yu Hsu, Adam Thrash, Mitsuko Yorkston, Clifford W. Morden, Jonathan F. Wendel, Daniel G. Peterson, Corrinne E. Grover

The paper provides genome assemblies for three extant Kokia species, revealing genetic diversity and divergence patterns in the Hawaiian Islands endemic genus.

G3 Genes Genomes Genetics · Aug 5, 2024Peer-reviewedGenomics

A high-quality chromosome-level genome assembly of rohu carp, Labeo rohita, and its utilization in SNP-based exploration of gene flow and sex determination

Mark A. Arick, Corrinne E. Grover, Chuan-Yu Hsu, Zenaida V. Magbanua, Olga Pechanova, Emma R. Miller, Adam Thrash, Ramey C. Youngblood, Lauren Ezzell, Md. Samsul Alam, John Benzie, Matthew Gray Hamilton, Attila Karsi, Mark L. Lawrence, Daniel G. Peterson

The paper presents a high-quality chromosome-level genome assembly for rohu carp and uses it to explore gene flow and sex determination through SNP analysis.

G3 Genes Genomes Genetics · Jan 13, 2023Peer-reviewedGenomics

Innovations in double digest restriction-site associated DNA sequencing (ddRAD-Seq) method for more efficient SNP identification

Zenaida V. Magbanua, Chuan-Yu Hsu, Olga Pechanova, Mark A. Arick, Corrinne E. Grover, Daniel G. Peterson

The paper introduces an improved ddRAD-Seq protocol that enhances SNP identification efficiency and reduces time, validated against whole genome resequencing data.

Analytical Biochemistry · Dec 5, 2022Peer-reviewedGenomics