Author

Clara Bonaiti

University of Milan

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3

Signature Assays, Organisms & Methods

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Assay:metagenomics· 3 Organism:human· 2 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

E. C. D'AuriaiD· 3 shared Francesco ComandatoreiD· 3 shared Gian Vincenzo ZuccottiiD· 3 shared Lodovico SterziiD· 3 shared Simona PanelliiD· 3 shared Giorgia Bettoni· 2 shared Stella PapaleoiD· 2 shared Diego Marco Minore· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 33 mutual co-author links

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3 shared papersMicrobiology

E. C. D'AuriaORCID

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Author profile →

3 papers

Recent·Most cited

Food-Allergic Children Harbour a Reduced Oral Bacterial Load, Giving Misleading 16S rRNA Amplicon Profiles

Simona Panelli, Lodovico Sterzi, Clara Bonaiti, Miriam Acunzo, Enza D’Auria, Gian Vincenzo Zuccotti, Francesco Comandatore

The paper reanalyzes oral microbiota data from food-allergic children using absolute abundance instead of relative abundance, revealing reduced bacterial load and altered functional predictions.

bioRxiv · Feb 10, 2026 · PreprintMicrobiology

A Simple and Cost-Effective Protocol for Enriching 'Ca. Saccharimonadia' from Human Saliva to Enable Efficient Genome Sequencing

Clara Bonaiti, Simona Panelli, Giorgia Bettoni, Lodovico Sterzi, Diego Marco Minore, Stella Papaleo, Enza D’Auria, Gianvincenzo Zuccotti, Francesco Comandatore

This paper develops a cost-effective protocol to enrich 'Ca. Saccharimonadia' from human saliva, enabling high-quality genome sequencing and metagenome-assembled genomes.

bioRxiv · Jul 17, 2025 · PreprintMicrobiology

RecA is a reliable marker for bacterial taxonomy, even in the Candidate Phyla Radiation

Lodovico Sterzi, Simona Panelli, Clara Bonaiti, Stella Papaleo, Giorgia Bettoni, E. C. D'Auria, Gianvincenzo Zuccotti, Francesco Comandatore

This study introduces RecA as a reliable genetic marker for bacterial taxonomy, showing it provides accurate taxonomic annotation comparable to multi-gene approaches, especially for the Candidate Phyla Radiation.

bioRxiv · Jun 21, 2024 · PreprintMicrobiology