Author

D. K. Sarkar

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 1 Biophysics· 1

Signature Assays, Organisms & Methods

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Research Focus:protein folding & dynamics· 2 Approach:deep learning· 1 Approach:experimental assay· 1 Assay:protein structure· 1 Approach:statistical model· 1

Frequent Co-Authors

J. Brezovsky· 2 shared B. Surpeta· 1 shared D. Mondal· 1 shared G. Franklin· 1 shared M. Bisht· 1 shared P. Bharadwaj· 1 shared S. K. Nataraj· 1 shared S. M. Shet· 1 shared

Activity by Year

2023-2023 · peak 2/yr

Co-Author Collaboration Network

9 top collaborators · 29 mutual co-author links

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2 shared papersBiophysics

J. Brezovsky

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2 papers

Recent·Most cited

Incorporating prior knowledge to seeds of adaptive sampling molecular dynamics simulations of ligand transport in enzymes with buried active sites

D. K. Sarkar, B. Surpeta, J. Brezovsky

The paper integrates prior knowledge into initial seeds for adaptive sampling simulations to better model ligand transport in enzymes with buried active sites, improving consistency and predictive accuracy.

bioRxiv · Sep 21, 2023 · PreprintBiophysics

Nano-structured Hydrotrope-Caged Cytochrome c with Boosted Stability in Harsh Environments: A Molecular Insight

P. Bharadwaj, D. K. Sarkar, M. Bisht, S. M. Shet, S. K. Nataraj, V. Lokesh, G. Franklin, J. Brezovsky, D. Mondal

This study demonstrates that ATP and [Cho][Sal] ionic liquid form nano-structures that stabilize Cytochrome c, enhancing its peroxidase activity and thermal tolerance under harsh conditions.

bioRxiv · Feb 5, 2023Biochemistry