Author

Dan Takase

Duke University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Biophysics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:deep learning· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:protein structure· 1 Research Focus:protein structure prediction· 1 Assay:proteomics· 1

Frequent Co-Authors

Hiroaki MatsunamiiD· 2 shared Aashish ManglikiD· 1 shared Aashutosh VihaniiD· 1 shared Claire A. de MarchiD· 1 shared Claudia Llinás del TorrentiD· 1 shared Conan JuaniD· 1 shared Hsiu-Yi LuiD· 1 shared Jeremy Aguilar· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBiophysics

Hiroaki MatsunamiORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Allosteric Gating Mechanism Regulates Odorant Selectivity and Antagonism in Odorant Receptors

Ning Ma, Mona A. Marie, Dan Takase, Claudia Llinás del Torrent, Jeremy Aguilar, Aashish Manglik, Hiroaki Matsunami, Nagarajan Vaidehi

This study investigates how odorant receptors regulate selectivity and antagonism through allosteric gating mechanisms using simulations and experiments.

bioRxiv · Jul 10, 2026 · PreprintBiophysics

Decoding Smell from Receptor Structure

Hiroaki Matsunami, Hsiu-Yi Lu, Aashutosh Vihani, Maira Nagai, Xiaoyang Hu, Dan Takase, Conan Juan, Claire A. de March

The paper trains a deep learning model to predict odorant receptor-ligand interactions using structural and functional data, revealing structural determinants of ligand selectivity.

bioRxiv · Apr 24, 2026 · PreprintMolecular Biology