Author

Danbi Byun

Carnegie Institution for Science

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Molecular Biology· 1 Plant Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Assay:proteomics· 3 Organism:Arabidopsis· 2 Research Focus:cell type annotation· 2 Organism:plant (other)· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Andres V. ReyesiD· 3 shared Ruben ShresthaiD· 3 shared Shou‐Ling XuiD· 3 shared Shane CareyiD· 2 shared Sumudu S KarunadasaiD· 2 shared TaraBryn S GrismeriD· 2 shared Weimin NiiD· 2 shared Hongchang CuiiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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3 shared papersSystems Biology

Andres V. ReyesORCID

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3 papers

Recent·Most cited

Proteomic Analysis Reveals Widespread Regulation of Substrate Protein Abundance by O-fucosylation and O-GlcNAcylation

Sumudu S Karunadasa, Andres V. Reyes, TaraBryn S Grismer, Ruben Shrestha, Danbi Byun, Shane Carey, Weimin Ni, Shou‐Ling Xu

The paper uses proteomic analysis to identify substrate proteins regulated by O-fucosylation and O-GlcNAcylation in Arabidopsis, revealing their roles in protein homeostasis and stress responses.

bioRxiv · Jan 19, 2026 · PreprintSystems Biology

Next-Generation Mapping of the ACINUS-Mediated Alternative Splicing Machinery and Its Regulation by O-glycosylation in Arabidopsis

Ruben Shrestha, Andres V. Reyes, Shane Carey, Sumudu S Karunadasa, Wenxuan Zhai, Danbi Byun, Wen‐Dar Lin, Jie Li, Kathrine Alerte, Hongchang Cui, Zhiyong Wang, Shou‐Ling Xu

The paper maps the Arabidopsis alternative splicing machinery and identifies O-glycosylation regulators affecting splicing through ACINUS-dependent and -independent pathways.

bioRxiv · Jan 4, 2025 · PreprintPlant Biology

Workflow enhancement of TurboID-mediated proximity labeling for SPY signaling network mapping

TaraBryn S Grismer, Sumudu S Karundasa, Ruben Shrestha, Danbi Byun, Weimin Ni, Andres V. Reyes, Shou‐Ling Xu

The paper improves TurboID-mediated proximity labeling by optimizing enrichment and analysis methods, identifying 160 SPY interactors including 100 novel ones.

bioRxiv · Feb 17, 2024 · PreprintMolecular Biology