Author

Daniel Barich

Kenyon College

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 3 Approach:statistical model· 3 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Joan L. SlonczewskiiD· 3 shared Audrey Gibson· 2 shared M. Siobhan FennessyiD· 2 shared Zachary C. Slimak· 2 shared A. Pilát· 1 shared Andrew M. Pilat· 1 shared Chelsea C. Menke· 1 shared Christopher J. SedlacekiD· 1 shared

Activity by Year

2019-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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3 shared papersMicrobiology

Joan L. SlonczewskiORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Comparative Analysis of Denitrification and Other Nitrogen Cycle Genes in Diverse Environmental Microbiomes

Andrew M. Pilat, Rachael E. Tomasko, Audrey Gibson, Daniel Barich, Zachary C. Slimak, M. Siobhan Fennessy, Joan L. Slonczewski

The paper compares denitrification and nitrogen cycle genes across seven microbiomes, finding differences in gene abundance and environmental factors influencing denitrifier activity.

bioRxiv · Aug 10, 2025 · PreprintMicrobiology

Pond Water Microbiome Taxa Profiles and Antibiotic Resistance Genes Associated with Acidity and Tannins

Maya Vaccaro, A. Pilát, Logan Gusmano, Minh T. N. Pham, Daniel Barich, Audrey Gibson, Mwï Epalle, Dominick J. Frost, Elianajoy Volin, Zachary C. Slimak, Chelsea C. Menke, M. Siobhan Fennessy, Joan L. Slonczewski

The paper analyzes microbial taxa and antibiotic resistance genes in four ponds, linking their prevalence to environmental factors like pH and tannins.

Microbiology Spectrum · Mar 25, 2025Peer-reviewedMicrobiology

A new method for rapid genome classification, clustering, visualization, and novel taxa discovery from metagenome

Zhong Wang, Harrison Ho, Rob S Egan, Shijie Yao, Dongwan Kang, Jeff L. Froula, Volkan Sevi̇m, Frederik Schulz, Jackie E. Shay, Derek N. Macklin, Kayla McCue, Rachel Orsini, Daniel Barich, Christopher J. Sedlacek, Wei Li, , Joan L. Slonczewski

Genome Constellation improves taxa assignment and discovers novel taxa in metagenomic datasets by clustering genomes based on k-mer similarities.

bioRxiv · Nov 9, 2019 · PreprintBioinformatics