Volkan Sevi̇m

Simultaneous single-cell CRISPR, RNA, and ATAC-seq enables multiomic CRISPR screens to identify gene regulatory relationships

The paper introduces CAT-ATAC, a method combining CRISPR, RNA, and ATAC-seq in single cells to identify gene regulatory relationships and validate them with loss-of-function experiments.

Variants in tubule epithelial regulatory elements mediate most heritable differences in human kidney function

This paper identifies genetic variants in tubule epithelial regulatory elements that explain most heritable differences in human kidney function using GWAS, scATAC-seq, and functional assays.

Hybrid Clustering of Long and Short-read for Improved Metagenome Assembly

This paper introduces a hybrid clustering algorithm for metagenome assembly that improves accuracy and scalability by combining long and short-read clustering.

A new method for rapid genome classification, clustering, visualization, and novel taxa discovery from metagenome

Genome Constellation improves taxa assignment and discovers novel taxa in metagenomic datasets by clustering genomes based on k-mer similarities.