Author

Daria Tupikina

Helmholtz Centre for Infection Research

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:benchmark study· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Organism:human· 1 Assay:protein structure· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Aleksandra KushnarevaiD· 1 shared Alexander BujotzekiD· 1 shared Alexey A. GurevichiD· 1 shared Alice Carolyn McHardyiD· 1 shared Andrea RoncoliiD· 1 shared Brennan AbanadesiD· 1 shared Hesham Almessady· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

7 top collaborators · 9 mutual co-author links

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1 shared paperBioinformatics

Aleksandra KushnarevaORCID

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2 papers

Recent·Most cited

Can Folding Models Tell Binders from Bluffers? Evidence from POISK: The Patent-Derived Antibody Dataset

Daria Tupikina, Andrea Roncoli, Alexander Bujotzek, Brennan Abanades

The paper benchmarks structure prediction models on a new antibody dataset to assess their ability to distinguish binders from decoys, finding moderate success but limitations in epitope localization.

bioRxiv · Oct 26, 2026 · PreprintBioinformatics

BGC-QUAST: a quality assessment tool for genome mining software

Aleksandra Kushnareva, Daria Tupikina, Hesham Almessady, Alice Carolyn McHardy, Alexey A. Gurevich

BGC-QUAST evaluates and compares BGC predictions across samples, assemblies, and tools to facilitate biosynthetic potential analysis.

bioRxiv · Sep 15, 2026 · PreprintBioinformatics