Next-generation Sequence-analysis Toolkit (NeST): A standardized bioinformatics framework for analyzing Single Nucleotide Polymorphisms in next-generation sequencing data
Shashidhar Ravishankar, Sarah E. Schmedes, Dhruviben Patel, Mateusz M. Pluciński, Venkatachalam Udhayakumar, Eldin Talundzic, Fredrik O. Vannberg
NeST is a variant calling framework that combines multiple callers to improve accuracy in identifying SNPs from NGS data, validated on Plasmodium falciparum isolates.
bioRxiv · May 21, 2018 · PreprintBioinformatics