Author

Sarah E. Schmedes

Centers for Disease Control and PreventionORCID 0000-0002-7216-849XUnclaimed ORCID profile · follow to get notified of new preprints

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Organism:plant (other)· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Dhruviben Patel· 1 shared Eldin Talundzic· 1 shared Fredrik O. VannbergiD· 1 shared Mateusz M. PlucińskiiD· 1 shared Shashidhar RavishankariD· 1 shared Venkatachalam UdhayakumariD· 1 shared

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2018-2018 · peak 1/yr

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6 top collaborators · 15 mutual co-author links

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1 shared paperBioinformatics

Dhruviben Patel

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintMay 21, 2018

Next-generation Sequence-analysis Toolkit (NeST): A standardized bioinformatics framework for analyzing Single Nucleotide Polymorphisms in next-generation sequencing data

Shashidhar Ravishankar, Sarah E. Schmedes, Dhruviben Patel…·Fredrik O. Vannberg

NeST is a variant calling framework that combines multiple callers to improve accuracy in identifying SNPs from NGS data, validated on Plasmodium falciparum isolates.

DOI 10.1101/323535

plant (other)whole-genome sequencing