Author

Venkatachalam Udhayakumar

Centers for Disease Control and PreventionORCID 0000-0003-0304-3383Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Organism:plant (other)· 2 Approach:statistical model· 2 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Eldin Talundzic· 2 shared Abdunoor M. KabanywanyiiD· 1 shared Ally MohamediD· 1 shared Bilali I. KabulaiD· 1 shared Billy NgasalaiD· 1 shared Catherine BakariiD· 1 shared Celine Isaack MandaraiD· 1 shared Chonge A. Kitojo· 1 shared

Activity by Year

2018-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersMolecular Biology

Eldin Talundzic

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2 papers

Recent·Most cited

Molecular BiologybioRxivPreprintJan 18, 2024

Trends of Plasmodium falciparum molecular markers associated with resistance to artemisinins and reduced susceptibility to lumefantrine in Mainland Tanzania from 2016 to 2021

Catherine Bakari, Celine Isaack Mandara, Rashid A. Madebe…·Deus S. Ishengoma

The paper analyzes trends of molecular markers of artemisinin resistance and lumefantrine susceptibility in Plasmodium falciparum from 2016 to 2021 in Tanzania, finding an increase in Y184F mutations and NFD haplotypes.

DOI 10.1101/2024.01.18.576107

plant (other)DNA methylation

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BioinformaticsbioRxivPreprintMay 21, 2018

Next-generation Sequence-analysis Toolkit (NeST): A standardized bioinformatics framework for analyzing Single Nucleotide Polymorphisms in next-generation sequencing data

Shashidhar Ravishankar, Sarah E. Schmedes, Dhruviben Patel…·Fredrik O. Vannberg

NeST is a variant calling framework that combines multiple callers to improve accuracy in identifying SNPs from NGS data, validated on Plasmodium falciparum isolates.

DOI 10.1101/323535

plant (other)whole-genome sequencing

𝕏 PostBluesky