Author

Dilip Abraham

Christian Medical College

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:long-read sequencing· 2 Research Focus:software / tool· 2 Organism:bacteria (other)· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Approach:statistical model· 1

Frequent Co-Authors

Anton SpadariD· 2 shared Blossom Benny· 2 shared Catherine M. TromaniD· 2 shared Ellis Owusu-Dabo· 2 shared Jaspreet MahindrooiD· 2 shared Karthikeyan GovindaniD· 2 shared Kathryn E. HoltiD· 2 shared Michael OwusuiD· 2 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Anton SpadarORCID

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2 papers

Recent·Most cited

EnviroAmpDesigner, a tool for designing high specificity multiplex PCR primer panels for detecting and subtyping a target organism in environmental surveillance samples

Anton Spadar, Jaspreet Mahindroo, Catherine M. Troman, Michael Owusu, Yaw Adu-Sarkodie, Ellis Owusu-Dabo, Dilip Abraham, Blossom Benny, Karthikeyan Govindan, Venkata Raghava Mohan, Zoe A. Dyson, Nicholas C. Grassly, Kathryn E. Holt

EnviroAmpDesigner designs multiplex PCR primer panels for detecting and subtyping specific bacteria in environmental samples, focusing on specificity and minimizing off-target amplification.

bioRxiv · Apr 10, 2025 · PreprintBioinformatics

AmpliconTyper tool for analysing ONT multiplex PCR data from environmental and other mixed sources

Anton Spadar, Jaspreet Mahindroo, Catherine M. Troman, Michael Owusu, Yaw Adu‐Sarkodie, Ellis Owusu-Dabo, Dilip Abraham, Blossom Benny, Karthikeyan Govindan, Venkata Raghava Mohan, Zoe A. Dyson, Nicholas C. Grassly, Kathryn E. Holt

AmpliconTyper is a tool for analysing ONT multiplex amplicon sequencing data from environmental samples, using machine learning to classify reads and identify SNPs.

bioRxiv · Jan 30, 2025 · PreprintGenomics