Anton Spadar

EnviroAmpDesigner designs multiplex PCR primer panels for detecting and subtyping specific bacteria in environmental samples, focusing on specificity and minimizing off-target amplification.

AmpliconTyper is a tool for analysing ONT multiplex amplicon sequencing data from environmental samples, using machine learning to classify reads and identify SNPs.

This paper reclassifies SHV β-lactamase alleles in K. pneumoniae genomes based on mutations, improving genotype-phenotype understanding and updating the Kleborate tool.

This study sequenced K. pneumoniae isolates from Southern Ghana, identifying genetic diversity, antimicrobial resistance, and virulence traits, highlighting the need for genomic surveillance.

The paper analyzes genetic diversity in four insecticide resistance genes of Aedes aegypti across global populations to identify mutations and copy number variations associated with insecticide resistance.