Comparative metagenomics using pan-metagenomics graphs
Izaak Coleman, Natalya Mametyarova, Andrey Zaznaev, Peiwen Cai, Lisa X Yu, Yoli Meydan, Aviya Litman, Ayushi Sharma, Lily He, Amanda Simkhovich, Dwayne Seeram, Heekuk Park, Yael R. Nobel, Aya Brown Kav, Itsik Pe’er, , Tal Korem
This paper introduces copangraph, a framework for comparative metagenomic analysis using sequence graphs, showing improved accuracy and computational efficiency in capturing genomic variation across microbial communities.
bioRxiv · Nov 24, 2025 · PreprintBioinformatics