Author

E. Koculi

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 1 Biophysics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:ATAC-seq· 1 Assay:bulk RNA-seq· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:chromatin & epigenetic regulation· 1 Organism:E. coli· 1 Organism:human· 1 Research Focus:protein folding & dynamics· 1

Frequent Co-Authors

A. F. T. Moore· 1 shared D. Thirumalai· 1 shared I. S. Weislow· 1 shared Y. Berhie· 1 shared

Activity by Year

2020-2024 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 3 mutual co-author links

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1 shared paperBiochemistry

A. F. T. Moore

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2 papers

Recent·Most cited

Substrate Specificities of DDX1: A Human DEAD-box protein

A. F. T. Moore, Y. Berhie, I. S. Weislow, E. Koculi

This study identifies the nucleotide substrates and RNA structures that stimulate DDX1 ATPase activity, showing DDX1 hydrolyzes only ATP and deoxy-ATP in the presence of RNA.

bioRxiv · Jan 9, 2024Biochemistry

Retardation of folding rates of substrate proteins in the nanocage of GroEL

E. Koculi, D. Thirumalai

The paper shows that the assisted folding rate of rhodanese in the GroEL/ES nanocage decreases, suggesting the chaperonin machinery optimizes the product of folding rate and yield rather than maximizing either individually.

bioRxiv · Nov 8, 2020Biophysics