Author

E. Loire

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 4 Ecology· 2

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 4 Research Focus:benchmarking· 3 Approach:statistical model· 3 Research Focus:cell type annotation· 2 Assay:metagenomics· 2 Organism:C. elegans· 1 Organism:chicken / avian· 1 Approach:contrastive learning· 1

Frequent Co-Authors

A. Exbrayat· 2 shared D. Severac· 2 shared F. Charriat· 2 shared M. Eloit· 2 shared M. Gautier· 2 shared N. Galtier· 2 shared P. Gil· 2 shared S. Gutierrez· 2 shared

Activity by Year

2017-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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2 shared papersEcology

A. Exbrayat

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Author profile →

6 papers

Recent·Most cited

Host influence on the eukaryotic virome of sympatric mosquitoes and abundance of diverse viruses with a broad host range.

C. Morel, P. Gil, A. Exbrayat, E. Loire, F. Charriat, B. Prepoint, C. Condachou, G. Gimonneau, A. G. Fall, B. Biteye, M. T. Seck, M. Eloit, S. Gutierrez

The paper examines how mosquito species influence virome diversity and abundance, finding that viromes differ mainly by species rather than habitat, with shared viral taxa varying in abundance.

bioRxiv · Nov 6, 2023Ecology

Spatial scale influences taxon conservation in the eukaryotic virome of a mosquito

P. Gil, A. Exbrayat, E. Loire, I. Rakotoarivoany, F. Charriat, T. Baldet, M. Boisseau, A. Marie, B. Frances, G. L'Ambert, M. Bessat, Y. Otify, M. Goffredo, G. Mancini, N. Busquets, , S. Gutierrez

The paper examines how spatial scale affects taxon conservation in the eukaryotic virome of Culex pipiens mosquitoes across multiple countries, revealing deterministic patterns in virome assembly.

bioRxiv · Nov 23, 2022 · PreprintEcology

Divergence of olfactory receptors associated with the evolution of assortative mating and reproductive isolation in mice

C. M. Smadja, E. Loire, P. Caminade, D. Severac, M. Gautier, G. Ganem

This study identifies olfactory receptor genes associated with assortative mating and reproductive isolation in mice by combining population genomics and functional predictions.

bioRxiv · Jul 21, 2022Evolutionary Biology

DILS : Demographic Inferences with Linked Selection by using ABC

C. Fraisse, I. Popovic, C. Mazoyer, B. Spataro, S. Delmotte, J. Romiguier, E. Loire, A. Simon, N. Galtier, L. Duret, N. Bierne, X. Vekemans, C. Roux

DILS performs demographic inferences with linked selection using ABC on population genomic data, identifying models and loci associated with gene flow and population size changes.

bioRxiv · Jun 15, 2020Evolutionary Biology

The genomic basis of colour pattern polymorphism in the harlequin ladybird

M. Gautier, J. Yamaguchi, J. Foucaud, A. Loiseau, A. Ausset, B. Facon, B. Gschloessl, J. Lagnel, E. Loire, H. Parrinello, D. Severac, C. Lopez-Roques, C. Donnadieu, M. Manno, H. Berges, , B. Prud'homme

This study identifies the gene pannier as controlling melanic pattern polymorphism in the harlequin ladybird through cis-regulatory allelic variation.

bioRxiv · Jun 13, 2018 · PreprintEvolutionary Biology

Lacking conservation genomics in the giant Galapagos tortoise

E. Loire, N. Galtier

The paper reanalyzes NGS data to show low genetic diversity and population substructure in giant Galapagos tortoises, challenging current conservation practices based on traditional markers.

bioRxiv · Sep 26, 2017Evolutionary Biology