Quality Control for Single Cell Analysis of High-plex Tissue Profiles using CyLinter
G. J. Baker, E. Novikov, Z. Zhao, T. Vallius, J. A. Davis, J.-R. Lin, J. L. Muhlich, E. A. Mittendorf, S. Santagata, J. L. Guerriero, P. K. Sorger
This paper introduces CyLinter, a quality control tool that removes imaging artefacts from high-plex spatial profiling data, improving single-cell analysis of archival tumor specimens.
bioRxiv · Nov 1, 2023Pathology