NANOME: A Nextflow pipeline for haplotype-aware allele-specific consensus DNA methylation detection by nanopore long-read sequencing
Yang Liu, Hash Brown Taha, Qiuyang Zhang, Ziwei Pan, Christina Chatzipantsiou, Emma Wade, Thatcher Slocum, Lasya Karuturi, Yue Zhao, Shilpita Karmakar, Sheng Li
NANOME improves DNA methylation detection using nanopore long-read sequencing by integrating multiple tools and enhancing precision and accuracy in human cell lines.
bioRxiv · Jun 29, 2025 · PreprintBioinformatics