Author
University of Geneva
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
5 papers
Recent·Most cited
Nikolaos M R Lykoskoufis, Evarist Planet, Halit Ongen, Didier Trono, Emmanouil T Dermitzakis
The paper identifies TE-eQTLs in colorectal cancer and shows that tumor-specific TEs mediate genetic effects on gene expression, including cancer driver genes.
La Perinola · Jan 25, 2024Peer-reviewedGenomics
Halit Ongen, Andrew A Brown, Olivier Delaneau, Nikolaos Panousis, Alexandra C Nica, GTEx Consortium, Emmanouil T Dermitzakis
This paper estimates the causal tissues for complex traits and diseases by analyzing eQTLs from the GTEx consortium and adapting the RTC score to calculate tissue sharing probabilities.
Nature Genetics · Oct 23, 2017Peer-reviewedGenetics
Christopher A Odhams, Andrea Cortini, Lingyan Chen, Amy L Roberts, Ana Vinuela, Alfonso Buil, Kerrin S Small, Emmanouil T Dermitzakis, David L Morris, Timothy J Vyse, Deborah S Cunninghame-Graham
This study uses RNA-Seq and GWAS-eQTL integration to identify novel SLE susceptibility genes, non-coding RNAs, and splicing events not detectable by microarrays.
bioRxiv · Sep 21, 2016Genetics
Matti Pirinen, Tuuli Lappalainen, Noah A Zaitlen, GTEx Consortium, Emmanouil T Dermitzakis, Peter Donnelly, Mark I McCarthy, Manuel A Rivas
The paper introduces a statistical method to analyze allele-specific expression across tissues and classifies variants based on their regulatory impact using RNA-seq data.
Bioinformatics · Mar 27, 2015Peer-reviewedBioinformatics
Alfonso Buil, Andrew A Brown, Tuuli Lappalainen, Ana Viñuela, Matthew N Davies, Houfeng F Zheng, Brent J Richards, Daniel Glass, Kerrin S Small, Richard Durbin, Timothy D Spector, Emmanouil T Dermitzakis
The paper uses RNA-seq and twin data to quantify gene-gene and gene-environment interactions affecting allelic specific expression.
bioRxiv · Oct 27, 2014Genomics