CATE: A fast and scalable CUDA implementation to conduct highly parallelized evolutionary tests on large scale genomic data.
Deshan Perera, Elsa Reisenhofer, Said Hussein, Eve Higgins, Christian D. Huber, Quan Long
CATE accelerates evolutionary genomic tests using GPU and CPU parallelization, achieving over 180x speedup compared to standard tools.
Methods in Ecology and Evolution · Jun 29, 2023Peer-reviewedBioinformatics