Author

F. Kümmerer

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 4

Signature Assays, Organisms & Methods

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Research Focus:protein folding & dynamics· 3 Approach:experimental assay· 2 Assay:protein structure· 2 Approach:statistical model· 2 Research Focus:chromatin & epigenetic regulation· 1 Approach:mechanistic / dynamical model· 1 Assay:structural biology· 1

Frequent Co-Authors

K. Lindorff-Larsen· 4 shared S. Orioli· 3 shared K. Teilum· 2 shared Y. Gavrilov· 2 shared A. Prestel· 1 shared B. L. de Groot· 1 shared D. Harding-Larsen· 1 shared F. Hoffmann· 1 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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4 shared papersBiophysics

K. Lindorff-Larsen

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4 papers

Recent·Most cited

Fitting Force Field parameters to NMR Relaxation Data

F. Kümmerer, S. Orioli, K. Lindorff-Larsen

This paper optimizes force field parameters using NMR relaxation data from T4 lysozyme and shows improved agreement with experimental data and better MD trajectory reweighting.

bioRxiv · Feb 10, 2023Biophysics

Double mutant of chymotrypsin inhibitor 2 stabilized through increased conformational entropy

Y. Gavrilov, F. Kümmerer, S. Orioli, A. Prestel, K. Lindorff-Larsen, K. Teilum

The paper investigates how mutations in CI2 affect conformational dynamics and stability, finding that increased native state entropy correlates with enhanced stability in double mutants.

bioRxiv · Nov 18, 2021Biophysics

Fitting side-chain NMR relaxation data using molecular simulations

F. Kümmerer, S. Orioli, D. Harding-Larsen, F. Hoffmann, Y. Gavrilov, K. Teilum, K. Lindorff-Larsen

The paper integrates side-chain NMR relaxation data with molecular dynamics simulations to improve the accuracy of protein dynamics models.

bioRxiv · Aug 18, 2020Biophysics

Computational Studies of Substrate Transport and Specificity in a Phospholipid Flippase

Y. Wang, J. A. Lyons, M. Timcenko, F. Kümmerer, B. L. de Groot, P. Nissen, V. Gapsys, K. Lindorff-Larsen

The paper uses molecular dynamics simulations to study phospholipid transport and specificity in a flippase, revealing a preference for phosphatidylserine and insights into substrate selectivity mechanisms.

bioRxiv · Jun 24, 2020 · PreprintBiophysics