Benchmarking AlphaFold3-like Methods for Protein-Peptide Complex Prediction
Fan Zhou, Shangwei Guo, Xiangda Peng, Shuhan Zhang, Cuicui Men, Xiaobo Duan, Guoliang Zhu, Zechen Wang, Weifeng Li, Yuguang Mu, Liangzhen Zheng, Haibin Liu, Sheng Wang
This study benchmarks AlphaFold3-like methods for predicting protein-peptide complex structures, showing improved accuracy but challenges in binding site prediction.
bioRxiv · Mar 9, 2025 · PreprintBioinformatics