Author

Fang-Chieh Chou

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2 Biochemistry· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:electronic health records· 1 Approach:experimental assay· 1 Research Focus:protein folding & dynamics· 1 Research Focus:protein structure prediction· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Rhiju DasiD· 3 shared Wipapat KladwangiD· 2 shared Clarence Cheng· 1 shared Kalli KappeliD· 1 shared Nathaniel Echols· 1 shared Pablo Cordero· 1 shared Siqi Tian· 1 shared Thomas C. Terwilliger· 1 shared

Activity by Year

2014-2016 · peak 2/yr

Co-Author Collaboration Network

8 top collaborators · 15 mutual co-author links

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3 shared papersBiophysics

Rhiju DasORCID

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Author profile →

3 papers

Recent·Most cited

Blind tests of RNA nearest neighbor energy prediction

Fang-Chieh Chou, Wipapat Kladwang, Kalli Kappel, Rhiju Das

This paper presents RECCES-Rosetta, a computational framework that accurately predicts RNA nearest neighbor energy parameters, including non-standard nucleotides, with RMSD below 1 kcal/mol in blind tests.

Proceedings of the National Academy of Sciences · Jul 8, 2016Peer-reviewedBiophysics

RNA Structure Refinement using the ERRASER-Phenix pipeline

Fang-Chieh Chou, Nathaniel Echols, Thomas C. Terwilliger, Rhiju Das

The paper introduces ERRASER-Phenix, a pipeline that improves RNA crystallographic models by combining diffraction-based refinement with real-space refinement, enhancing geometrical quality and fit to diffraction data.

Methods in Molecular Biology · Jan 1, 2016Peer-reviewedBiophysics

MOHCA-seq: RNA 3D models from single multiplexed proximity-mapping experiments

Clarence Cheng, Fang-Chieh Chou, Wipapat Kladwang, Siqi Tian, Pablo Cordero, Rhiju Das

MOHCA-seq provides nucleotide-resolution RNA 3D structure models from single experiments, revealing new insights into ligand-induced conformational changes in riboswitches.

bioRxiv · Apr 25, 2014 · PreprintBiochemistry