Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)
Alvin X. Han, Edyth Parker, Frits Scholer, Sebastian Maurer‐Stroh, Colin A. Russell
PhyCLIP provides a statistically principled phylogenetic clustering framework without arbitrary distance thresholds, improving resolution of pathogen subpopulations.
Molecular Biology and Evolution · Mar 6, 2019Peer-reviewedBioinformatics