BioinformaticsJournal of CheminformaticsPeer-reviewed
All-Atom Protein Sequence Design using Discrete Diffusion Models
Amelia Villegas-Morcillo, G. Admiraal, Marcel J. T. Reinders, Jana M. Weber
This paper introduces a discrete diffusion model for protein sequence design using all-atom representations, showing improved novelty and diversity compared to amino acid-based models.
DOI 10.1186/s13321-025-01121-1