BioinformaticsbioRxivPreprint
Snekmer Learn/Apply: A kmer-based vector similarity approach to proteinclassification suitable for metagenomic datasets
Tara A. Nitka, Jeremy Jacobson, Christine Chang…·Jason McDermott
The paper introduces an extension to the Snekmer tool that uses kmer libraries to annotate protein sequences with functional annotations, showing improved sensitivity over HMMs in metagenomic datasets.
DOI 10.1101/2025.05.16.654600