Author

Henry Valeyre

ETH Zurich

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Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:Hi-C· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Adriano Luca MartinelliiD· 1 shared Federico GossiiD· 1 shared Marianna RapsomanikiiD· 1 shared Pushpak PatiiD· 1 shared Vignesh Ram SomnathiD· 1 shared

Activity by Year

2022-2022 · peak 1/yr

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5 top collaborators · 10 mutual co-author links

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1 shared paperBioinformatics

Adriano Luca MartinelliORCID

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1 paper

Recent·Most cited

ChromFormer: A transformer-based model for 3Dgenome structure prediction

Henry Valeyre, Pushpak Pati, Federico Gossi, Vignesh Ram Somnath, Adriano Luca Martinelli, Marianna Rapsomaniki

ChromFormer predicts 3D chromatin structures from Hi-C data using a transformer-based model, outperforming existing methods on synthetic data and matching results on experimental data.

bioRxiv · Nov 15, 2022 · PreprintBioinformatics