ArchaicSeeker 3.0: A deep-learning framework for scalable, haplotype-resolved inference of archaic introgression
Baonan Wang, Chang Lei, Huanyu Lin, 石少康, Xixian Ma, Weishun Zeng, Kai Yuan, Xumin Ni, Shuhua Xu
ArchaicSeeker 3.0 detects archaic introgression using deep learning, outperforming existing methods in precision, recall, and F1 score across diverse genomic contexts and population sizes.
bioRxiv · May 6, 2026 · PreprintBioinformatics