AtRTD2: A Reference Transcript Dataset for accurate quantification of alternative splicing and expression changes in Arabidopsis thaliana RNA-seq data
Runxuan Zhang, Cristiane P G Calixto, Yamile Marquez, Peter Venhuizen, Nikoleta A Tzioutziou, Wenbin Guo, Mark Spensley, Nicolas Frei dit Frey, Heribert Hirt, Allan B James, Hugh G Nimmo, Andrea Barta, Maria Kalyna, John W S Brown
The paper develops AtRTD2, a comprehensive transcript dataset for Arabidopsis thaliana RNA-seq analysis, and introduces AtRTD2-QUASI to improve alternative splicing quantification.
bioRxiv · May 6, 2016Genomics