Author

Yamile Marquez

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Genomics· 1

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Organism:Arabidopsis· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Approach:statistical model· 1

Frequent Co-Authors

Allan B James· 1 shared Andrea BartaiD· 1 shared Cristiane P G Calixto· 1 shared Heribert Hirt· 1 shared Hugh G Nimmo· 1 shared John W S Brown· 1 shared Maria KalynaiD· 1 shared Mark SpensleyiD· 1 shared

Activity by Year

2016-2016 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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1 shared paperGenomics

Allan B James

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1 paper

Recent·Most cited

AtRTD2: A Reference Transcript Dataset for accurate quantification of alternative splicing and expression changes in Arabidopsis thaliana RNA-seq data

Runxuan Zhang, Cristiane P G Calixto, Yamile Marquez, Peter Venhuizen, Nikoleta A Tzioutziou, Wenbin Guo, Mark Spensley, Nicolas Frei dit Frey, Heribert Hirt, Allan B James, Hugh G Nimmo, Andrea Barta, Maria Kalyna, John W S Brown

The paper develops AtRTD2, a comprehensive transcript dataset for Arabidopsis thaliana RNA-seq analysis, and introduces AtRTD2-QUASI to improve alternative splicing quantification.

bioRxiv · May 6, 2016Genomics