Author

I. S. Mihai

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 2 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:deep learning· 2 Organism:human· 2 Assay:multiome· 2 Assay:scATAC-seq· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

J. Henriksson· 3 shared J. Trygg· 2 shared M. Selinger· 2 shared A. Dernstedt· 1 shared A. K. Overby· 1 shared D. Marcellino· 1 shared E. Nilsson· 1 shared E. Rosendal· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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3 shared papersImmunology

J. Henriksson

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Author profile →

3 papers

Recent·Most cited

Telomemore enables single-cell analysis of cell cycle and chromatin condensation

I. Yakovenko, I. S. Mihai, M. Selinger, W. Rosenbaum, A. Dernstedt, R. Groning, J. Trygg, L. Carroll, M. Forsell, J. Henriksson

Telomemore quantifies subtelomeric reads from single-cell data to assess chromatin condensation and complements cell cycle analysis in single-cell RNA-seq.

Nucleic Acids Research · Jan 29, 2025Peer-reviewedImmunology

The CD4 T cell epigenetic JUNB+ state is associated with proliferation and exhaustion

I. S. Mihai, M. Selinger, N. Boucheron, M. N. Forsell, I. Magalhaes, J. Trygg, J. Henriksson

The paper identifies a JUNB+ epigenetic state in CD4 T cells associated with proliferation, exhaustion, and memory formation, and develops a new machine learning tool to analyze its regulation.

bioRxiv · Jan 5, 2024 · PreprintImmunology

Type I interferon shapes brain distribution and tropism of tick-borne flavivirus

N. Chotiwan, E. Rosendal, S. M. A. Willekens, E. Schexnaydre, E. Nilsson, R. Lindqvist, M. Hahn, I. S. Mihai, F. Morini, J. Zhang, G. Ebel, L.-A. Carlson, J. Henriksson, U. Ahlgren, D. Marcellino, A. K. Overby

The paper uses multimodal imaging and single nuclei RNA-sequencing to study how type I interferon affects viral tropism in the brain during flavivirus infection in mice.

bioRxiv · Nov 16, 2021Microbiology