Author

Ioannis Xenarios

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 3 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:variant effect prediction· 2 Assay:whole-exome sequencing· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Organism:human· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Robin Liechti· 2 shared Alexandre Masselot· 1 shared Amalio TelentiiD· 1 shared Antonio RauselliD· 1 shared Aurélien NaldiiD· 1 shared Christoph Müssel· 1 shared Claudine ChaouiyaiD· 1 shared Denis ThieffryiD· 1 shared

Activity by Year

2014-2016 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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2 shared papersBioinformatics

Robin Liechti

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Varapp: A reactive web-application for variants filtering

Julien Delafontaine, Alexandre Masselot, Robin Liechti, Dmitry Kuznetsov, Ioannis Xenarios, Sylvain Pradervand

Varapp filters variants from exome data quickly and offers scenarios for Mendelian diseases, with a reactive web interface and open-source code.

bioRxiv · Jun 28, 2016 · PreprintBioinformatics

SourceData - a semantic platform for curating and searching figures

Robin Liechti, Nancy George, Sara El-Gebali, Lou Götz, Isaac Crespo, Ioannis Xenarios, Thomas Lemberger

SourceData provides a platform for sharing scientific figures and source data, enhancing discoverability by linking data content to papers.

bioRxiv · Jun 20, 2016Bioinformatics

Cooperative development of logical modelling standards and tools with CoLoMoTo

Aurélien Naldi, Pedro T Monteiro, Christoph Müssel, the Consortium for Logical Models and Tools, Hans A Kestler, Denis Thieffry, Ioannis Xenarios, Julio Saez-Rodriguez, Tomas Helikar, Claudine Chaouiya

The paper outlines the logical modelling framework and achievements of the Consortium for Logical Models and Tools, emphasizing model reusability and interoperability.

Bioinformatics · Apr 1, 2015Peer-reviewedSystems Biology

Analysis of stop-gain and frameshift variants in human innate immunity genes

Antonio Rausell, Pejman Mohammadi, Paul J McLaren, Ioannis Xenarios, Jacques Fellay, Amalio Telenti

The paper develops a Bayesian classification scheme to rank the pathogenicity of stop-gain and frameshift variants in innate immunity genes using sequence-based features and validates it against known disease variants.

bioRxiv · Mar 17, 2014Bioinformatics