BioinformaticsbioRxivPreprint
Ultra-fast genotyping of SNPs and short indels using GPU acceleration
Jørgen Wictor Henriksen, Knut Dagestad Rand, Geir Kjetil Sandve, Ivar Grytten
GKAGE is a GPU-accelerated genotyper that improves the speed of SNP and short indel genotyping by an order of magnitude compared to CPU-based methods like KAGE.
DOI 10.1101/2023.04.14.534526