Author

J. A. Kimbrel

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4 Ecology· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 6 Assay:metagenomics· 3 Research Focus:cell type annotation· 2 Research Focus:ecology & biodiversity· 2 Research Focus:host-pathogen & immune response· 2 Research Focus:clustering· 1 Assay:metabolomics· 1 Organism:plant (other)· 1

Frequent Co-Authors

J. Pett-Ridge· 3 shared S. J. Blazewicz· 3 shared X. Mayali· 3 shared A. Greenlon· 2 shared B. A. Hungate· 2 shared B. J. Koch· 2 shared D. Isailovic· 2 shared E. A. Kiledal· 2 shared

Activity by Year

2021-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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3 shared papersMicrobiology

J. Pett-Ridge

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

THE DUAL ROLE OF THE MICROCYSTIS AERUGINOSA MICROBIOME ON CYANOTOXIN PRODUCTION: COMPETITION FOR AND REMINERALIZATION OF ORGANIC NITROGEN

W. Li, D. Baliu-Rodriguez, S. H. Premathilaka, S. I. Thenuwara, J. A. Kimbrel, T. J. Samo, C. Ramon, E. A. Kiledal, S. R. Rivera, J. Kharbush, P. Weber, G. J. Dick, D. Isailovic, X. Mayali

This study investigates how organic nitrogen inputs and associated microbial communities affect Microcystis growth and toxin production, showing that microbial interactions influence nitrogen availability and cyanotoxin levels.

bioRxiv · Oct 18, 2023 · PreprintMicrobiology

The Western Lake Erie Culture Collection: A promising resource for evaluating the physiological and genetic diversity of Microcystis and its associated microbiome

C. E. Yancey, E. A. Kiledal, V. J. Denef, R. M. Errera, J. T. Evans, L. Hart, D. Isailovic, W. James, J. J. Kharbush, J. A. Kimbrel, W. Li, X. Mayali, H. Nitschky, C. Polik, M. A. Powers, , G. J. Dick

The paper isolates and sequences 21 Microcystis cultures from Lake Erie, revealing genomic diversity and toxin production variability, along with associated bacterial communities.

bioRxiv · Oct 21, 2022Microbiology

HT-SIP: A semi-automated Stable Isotope Probing pipeline identifies interactions in the hyphosphere of arbuscular mycorrhizal fungi

E. E. Nuccio, S. J. Blazewicz, M. Lafler, A. N. Campbell, A. Kakouridis, J. A. Kimbrel, J. Wollard, D. Vyshenska, R. Riley, A. Tomatsu, R. Hestrin, R. Malmstrom, M. K. Firestone, J. Pett-Ridge

The paper introduces a semi-automated DNA-SIP pipeline to improve efficiency and reproducibility in microbial community studies, demonstrating its application in analyzing the hyphosphere of arbuscular mycorrhizal fungi.

bioRxiv · Jul 1, 2022 · PreprintMicrobiology

Quantitative stable-isotope probing (qSIP) with metagenomics links microbial physiology and activity to soil moisture in Mediterranean-climate grassland ecosystems

A. Greenlon, E. T. Sieradzki, O. Zablocki, B. J. Koch, M. M. Foley, J. A. Kimbrel, B. A. Hungate, S. J. Blazewicz, E. E. Nuccio, C. L. Sun, A. Chew, C.-J. Mancilla, M. B. Sullivan, M. K. Firestone, J. Pett-Ridge, J. F. Banfield

This study uses qSIP with metagenomics to link microbial activity and physiology to soil moisture in Mediterranean grasslands, finding that precipitation levels influence microbial growth and phage dynamics.

bioRxiv · May 2, 2022Microbiology

Active communities and growth of soil microorganisms are framed by mean annual precipitation in three California annual grasslands

M. M. Foley, S. J. Blazewicz, K. J. McFarlane, A. Greenlon, M. Hayer, J. A. Kimbrel, B. J. Koch, V. Monsaint-Queeney, K. Morrison, E. M. Morrissey, B. A. Hungate, J. Pett-Ridge

The paper examines how mean annual precipitation affects microbial community growth and soil carbon cycling in three California grasslands, finding that growth rates and community composition vary with precipitation.

bioRxiv · Dec 6, 2021Ecology

Bacterial response to spatial gradients of algal-derived nutrients in a porous microplate

H. Kim, J. A. Kimbrel, C. A. Vaiana, J. R. Wollard, X. Mayali, C. R. Buie

The paper develops a hydrogel-based microplate to study bacterial responses to spatial nutrient gradients from algae, showing taxon-specific community development influenced by nutrient availability.

bioRxiv · Jun 23, 2021Ecology