Author

J. D. Orkin

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Ecology· 1 Evolutionary Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:non-human primate· 3 Research Focus:cell type annotation· 2 Assay:proteomics· 2 Approach:statistical model· 2 Research Focus:clustering· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1

Frequent Co-Authors

A. D. Melin· 2 shared B. Roediger· 1 shared B. Shaban· 1 shared C. J. Jolly· 1 shared D. Juan· 1 shared D. M. Alba· 1 shared E. Cappellini· 1 shared E. Lizano· 1 shared

Activity by Year

2019-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersEcology

A. D. Melin

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Phylogenetic signal in primate tooth enamel proteins and its relevance for paleoproteomics

J. Krueger, R. Fong Zazueta, D. M. Alba, X. Aymerich, R. M. D. Beck, E. Cappellini, G. Carrillo Martin, O. Cirilli, N. Clark, O. E. Cornejo, K. Farh, L. Ferrandez-Peral, D. Juan, J. L. Kelley, L. F. K. Kuderna, , E. Lizano

The paper evaluates the reliability of phylogenetic inference using primate enamel proteins by simulating sequence fragmentation and comparing results to a reference species tree.

bioRxiv · Feb 28, 2024 · PreprintEvolutionary Biology

Activity budget and gut microbiome structure across reproductive states in wild, female capuchin monkeys

S. E. Webb, J. D. Orkin, R. E. Williamson, A. D. Melin

The paper examines activity patterns and gut microbiome changes in capuchin monkeys across reproductive states, finding stable behaviors but microbial pathway shifts in lactation.

bioRxiv · Aug 9, 2021 · PreprintEcology

MKPV (aka MuCPV) and related chapparvoviruses are nephro-tropic and encode novel accessory proteins p15 and NS2

C. J. Jolly, Q. Lee, M. P. Padula, N. Pinello, S. H. Williams, M. B. O'Rourke, M. J. Fumagalli, J. D. Orkin, B. Shaban, O. Brenner, W. Weninger, W. M. d. Souza, A. D. Melin, J. J.- L. Wong, M. J. Crim, , B. Roediger

This study identifies novel accessory proteins in chapparvoviruses and proposes a new genus classification based on host tropism and sequence identity.

bioRxiv · Aug 15, 2019 · PreprintMicrobiology