Author

J. J. Kenyon

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 4 Research Focus:database / resource· 3 Approach:experimental assay· 3 Organism:Arabidopsis· 2 Research Focus:variant calling· 2 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Organism:human· 1

Frequent Co-Authors

S. M. Cahill· 2 shared A. Valcek· 1 shared B. Drigo· 1 shared B. Sorbello· 1 shared C. Philippe· 1 shared C. Van der Henst· 1 shared C. Whiteway· 1 shared E. Donner· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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2 shared papersMicrobiology

S. M. Cahill

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4 papers

Recent·Most cited

Genomic Analysis of Diverse Environmental Acinetobacter Isolates Identifies Plasmids, Antibiotic Resistance Genes, and Capsular Polysaccharides Shared with Clinical Strains

L. A. Tobin, V. M. Jarocki, J. J. Kenyon, B. Drigo, E. Donner, S. P. Djordjevic, M. Hamidian

This study analyzes environmental Acinetobacter isolates to identify shared plasmids, antibiotic resistance genes, and virulence factors with clinical strains.

bioRxiv · Oct 18, 2023 · PreprintMicrobiology

Identification of further variation at the lipooligosaccharide outer core locus in Acinetobacter baumannii genomes and extension of the OCL reference sequence database for Kaptive

B. Sorbello, S. M. Cahill, J. J. Kenyon

This study identifies six new OCL types in A. baumannii genomes and updates the OCL reference database to include 22 sequences, enhancing strain identification and surveillance.

bioRxiv · Feb 23, 2023 · PreprintMicrobiology

What are the reference strains of Acinetobacter baumannii referring to?

C. Philippe, A. Valcek, C. Whiteway, E. Robino, K. Nesporova, M. Bove, T. Coenye, T. De Pooter, W. De Coster, M. Strazisar, J. J. Kenyon, C. Van der Henst

This study compares modern clinical isolates and reference strains of Acinetobacter baumannii, revealing significant genetic and phenotypic differences that challenge the use of traditional reference strains.

bioRxiv · Feb 27, 2022 · PreprintMicrobiology

Identification of Acinetobacter baumannii loci for capsular polysaccharide (KL) and lipooligosaccharide outer core (OCL) synthesis in genome assemblies using curated reference databases compatible with Kaptive

K. L. Wyres, S. M. Cahill, K. E. Holt, R. M. Hall, J. J. Kenyon

This paper creates curated databases for Acinetobacter baumannii capsular polysaccharide and outer core loci, compatible with Kaptive, and validates their utility in typing genome assemblies.

bioRxiv · Dec 10, 2019Microbiology