Author

J. L. Soyer

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Pathology· 3 Microbiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Assay:bulk RNA-seq· 3 Research Focus:cell type annotation· 2 Assay:ChIP-seq· 2 Research Focus:chromatin & epigenetic regulation· 2 Research Focus:differential expression· 2 Organism:plant (other)· 2 Organism:fungi (other)· 1

Frequent Co-Authors

E. J. Gay· 3 shared M.-H. Balesdent· 3 shared T. Rouxel· 3 shared I. Fudal· 2 shared A. Levrel· 1 shared A. Porquier· 1 shared C. Clairet· 1 shared C. Cruaud· 1 shared

Activity by Year

2019-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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3 shared papersPathology

E. J. Gay

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Meiotic recombination in Leptosphaeria maculans favours the rise of transgressive isolates adapted to a nonhost species, Brassica carinata

J. M. Noah, M. Gorse, C.-A. Romain, E. J. Gay, T. Rouxel, M.-H. Balesdent, J. L. Soyer

The paper shows that meiotic recombination in Leptosphaeria maculans produces isolates better adapted to the nonhost Brassica carinata than their parental isolates.

bioRxiv · Feb 15, 2024 · PreprintPathology

Chromatin-immunoprecipitation reveals the PnPf2 transcriptional network controlling effector-mediated virulence in a fungal pathogen of wheat

E. John, K. B. Singh, R. P. Oliver, J. L. Soyer, J. Muria-Gonzalez, D. Soo, S. Jacques, K.-C. Tan

This study identifies PnPf2 as a central transcriptional regulator of virulence in Parastagonospora nodorum by characterizing its genomic targets and associated transcription factors.

bioRxiv · Jun 16, 2022Pathology

Regulation of effector gene expression as concerted waves in Leptosphaeria maculans: a two-players game

C. Clairet, E. J. Gay, A. Porquier, F. Blaise, C.-L. Marais, M.-H. Balesdent, T. Rouxel, J. L. Soyer, I. Fudal

This study investigates the regulation of effector gene expression in Leptosphaeria maculans, showing that KMT1 and LmPf2 antagonistically control effector gene expression during infection.

bioRxiv · Dec 15, 2021 · PreprintPlant Biology

Large-scale transcriptomics to dissect two years of the life of a fungal phytopathogen interacting with its host plant

E. J. Gay, J. L. Soyer, N. Lapalu, J. Linglin, I. Fudal, C. Da Silva, P. Wincker, J.-M. Aury, C. Cruaud, A. Levrel, J. Lemoine, R. Delourme, T. Rouxel, M.-H. Balesdent

This paper uses large-scale transcriptomics to analyze the gene expression of Leptosphaeria maculans over two years of interaction with its host plant, identifying 9% of genes involved in infection stages and revealing their chromatin localization.

BMC Biology · Mar 23, 2021Peer-reviewedPathology

In planta chromatin immunoprecipitation in Zymoseptoria tritici reveals chromatin-based regulation of putative effector gene expression

J. L. Soyer, J. Grandaubert, J. Haueisen, K. Schotanus, E. Holtgrewe Stukenbrock

The paper uses in planta ChIP-seq to show that heterochromatic genes in Zymoseptoria tritici are up-regulated during necrotrophy, suggesting histone modifications regulate effector gene expression.

bioRxiv · Feb 8, 2019 · PreprintMicrobiology