Author

K. Schotanus

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Assay:ChIP-seq· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Organism:fungi (other)· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

B. C. Thimmappa· 1 shared B. Kronmiller· 1 shared B. M. Tyler· 1 shared E. H. Stukenbrock· 1 shared E. Holtgrewe Stukenbrock· 1 shared E. P. Malc· 1 shared H. Chen· 1 shared H. Shu· 1 shared

Activity by Year

2019-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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1 shared paperMicrobiology

B. C. Thimmappa

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3 papers

Recent·Most cited

The insertion of a mitochondrial selfish element into the nuclear genome and its consequences

J. Y. Dutheil, K. Münch, K. Schotanus, E. H. Stukenbrock, R. Kahmann

The paper describes the accidental integration of a mitochondrial homing endonuclease into the nuclear genome of Ustilago maydis, resulting in a non-functional gene and a truncated helicase gene.

bioRxiv · May 16, 2020Evolutionary Biology

Long transposon-rich centromeres in an oomycete reveal divergence of centromere features in Stramenopila-Alveolata-Rhizaria lineages

Y. Fang, M. A. Coelho, H. Shu, K. Schotanus, B. C. Thimmappa, V. Yadav, H. Chen, E. P. Malc, J. Wang, P. Mieczkowski, B. Kronmiller, B. M. Tyler, K. Sanyal, S. Dong, M. Nowrousian, J. Heitman

This paper identifies centromeres in Phytophthora sojae using long-read sequencing and ChIP-seq, revealing transposon-rich, heterochromatic regions distinct from other SAR supergroup organisms.

bioRxiv · Jan 30, 2020Microbiology

In planta chromatin immunoprecipitation in Zymoseptoria tritici reveals chromatin-based regulation of putative effector gene expression

J. L. Soyer, J. Grandaubert, J. Haueisen, K. Schotanus, E. Holtgrewe Stukenbrock

The paper uses in planta ChIP-seq to show that heterochromatic genes in Zymoseptoria tritici are up-regulated during necrotrophy, suggesting histone modifications regulate effector gene expression.

bioRxiv · Feb 8, 2019 · PreprintMicrobiology