Author

J. Nordlund

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Evolutionary Biology· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:deep learning· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1

Frequent Co-Authors

A. Ameur· 2 shared Y. Marincevic-Zuniga· 2 shared A. Ambicka· 1 shared A. Bremer· 1 shared A. C. Rönnberg-Wästljung· 1 shared A. Churcher· 1 shared A. Johansson· 1 shared A. Jozkowicz· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

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2 shared papersCancer Biology

A. Ameur

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

A complete digital karyotype of the B-cell leukemia REH cell line resolved by long-read sequencing

M. Lysenkova Wiklander, G. Arvidsson, I. Bunikis, A. Lundmark, A. Raine, Y. Marincevic-Zuniga, H. Gezelius, A. Bremer, L. Feuk, A. Ameur, J. Nordlund

This paper creates a complete digital karyotype of the REH B-cell leukemia cell line using long-read and short-read sequencing technologies, identifying structural variants and fusion genes.

bioRxiv · Mar 8, 2023Cancer Biology

Immune cells lacking Y chromosome have widespread dysregulation of autosomal genes

J. P. Dumanski, J. Halvardson, H. Davies, E. Rychlicka-Buniowska, J. Mattisson, B. Torabi Moghadam, N. Nagy, K. Weglarczyk, K. Bukowska-Strakova, M. Danielsson, P. Olszewski, A. Piotrowski, E. Oerton, A. Ambicka, M. Przewoznik, , L. A. Forsberg

The paper examines immune cells with mosaic loss of the Y chromosome, finding widespread dysregulation of autosomal genes and linking this to immune dysfunction and disease.

bioRxiv · Feb 16, 2020Immunology

The proliferative history shapes the DNA methylome of B-cell tumors and predicts clinical outcome

M. Duran-Ferrer, G. Clot, F. Nadeu, R. Beekman, T. Bauman, J. Nordlund, Y. Marincevic-Zuniga, G. Lonnerholm, A. Rivas, S. Martin, R. Ordonez, G. Castellano, M. Kulis, A. Queiros, L. Seung-Tae, , J. I. Martin-Subero

This study analyzes DNA methylation in B-cell tumors to show its relation to proliferative history and clinical outcomes, introducing a new mitotic clock for prognosis.

bioRxiv · Feb 6, 2020Cancer Biology

Single-molecule genome assembly of the Basket Willow, Salix viminalis, reveals earliest stages of sex chromosome expansion

P. Almeida, E. Proux-Wera, A. Churcher, L. Soler, J. Dainat, P. Pucholt, J. Nordlund, T. Martin, A. C. Rönnberg-Wästljung, B. Nystedt, S. Berlin, J. E. Mank

This study assembles and annotates the genome of Salix viminalis to investigate early stages of sex chromosome formation, revealing low Z/W divergence and conserved gene order.

bioRxiv · Mar 28, 2019 · PreprintEvolutionary Biology