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J. P. Vayrynen

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Cancer Biology· 1

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Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

A. d. Silva· 1 shared A. Dias Costa· 1 shared C. J. Wu· 1 shared C. S. Fuchs· 1 shared J. A. Nowak· 1 shared J. Borowsky· 1 shared J. K. Lennerz· 1 shared J. Yeong· 1 shared

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2020-2020 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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1 shared paperCancer Biology

A. d. Silva

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1 paper

Recent·Most cited

Cancer BiologybioRxivPreprintMay 29, 2020

Tumor-Immune Partitioning and Clustering (TIPC) algorithm reveals distinct signatures of tumor-immune cell interactions within the tumor microenvironment

M. C. Lau, J. Borowsky, J. P. Vayrynen…·J. A. Nowak

The paper introduces TIPC, a computational algorithm that identifies tumor-immune spatial patterns in colorectal cancer, linking them to patient survival and tumor features.

DOI 10.1101/2020.05.29.111542

humanbulk RNA-seq

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