Author

J. Rudra

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Biophysics· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Organism:mouse· 1 Assay:protein sequence· 1 Assay:proteomics· 1 Research Focus:sequence-to-function modeling· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

A. Das· 1 shared A. Wasim· 1 shared D. Kim· 1 shared J. Buck· 1 shared J. Mondal· 1 shared M. Howard· 1 shared M. Jackrel· 1 shared P. Latua· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBiophysics

A. Das

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Harnessing Transformers to Generate Protein Sequences Prone to Liquid Liquid Phase Separation

A. Wasim, U. Pramanik, A. Das, P. Latua, J. Rudra, J. Mondal

This paper uses GPT-based models to generate protein sequences prone to liquid-liquid phase separation and validates their ability to form phase-separated states.

bioRxiv · Mar 2, 2024 · PreprintBiophysics

Amyloidogenic Propensity of Self-Assembling Peptides and their Adjuvant Potential for use as DNA Vaccines

P. Shrimali, S. Chen, R. Dreher, M. Howard, J. Buck, D. Kim, J. Rudra, M. Jackrel

This study characterizes the amyloidogenic properties of a self-assembling peptide and demonstrates its safety and adjuvant potential as a DNA vaccine platform.

bioRxiv · Sep 9, 2022Bioengineering