Author

J. Stapley

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 3 Pathology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Assay:DNA methylation· 1 Research Focus:GWAS / association mapping· 1 Research Focus:host-pathogen & immune response· 1 Organism:non-human primate· 1

Frequent Co-Authors

C. Chen· 2 shared E. Neu· 2 shared F. J. Kopisch-Obuch· 2 shared H. Keunecke· 2 shared A. Cang· 1 shared A. D. Treindl· 1 shared A. Leuchtmann· 1 shared A. Mouton· 1 shared

Activity by Year

2023-2023 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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2 shared papersPathology

C. Chen

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Author profile →

4 papers

Recent·Most cited

Teaching transposon classification as a means to crowd source the curation of repeat annotation - a tardigrade perspective

V. Peona, J. Martelossi, D. Almojil, J. Bocharkina, I. Brännström, M. Brown, A. Cang, T. Carrasco-Valenzuela, J. DeVries, M. Doellman, D. Elsner, P. Espindola-Hernandez, G. Friis, B. Gaspar, D. Zagorski, , A. Suh

The paper presents a crowd-sourcing approach to manually curate and classify transposable elements (TEs) from tardigrade genomes, resulting in the discovery of hundreds of new TEs.

bioRxiv · Nov 6, 2023Evolutionary Biology

Molecular epidemiology of Cercospora leaf spot on resistant and susceptible sugar beet hybrids

C. Chen, H. Keunecke, E. Neu, F. J. Kopisch-Obuch, B. A. McDonald, J. Stapley

The paper studies how resistant and susceptible sugar beet hybrids affect the epidemiology of Cercospora leaf spot using molecular methods.

bioRxiv · Oct 30, 2023Pathology

Genome-wide association studies reveal a rapidly evolving candidate avirulence effector in the Cercospora leaf spot pathogen Cercospora beticola

C. CHEN, H. Keunecke, F. Bemm, G. Gyetvai, E. Neu, F. J. Kopisch-Obuch, B. McDonald, J. Stapley

This study identifies a rapidly evolving avirulence effector gene, AvrCR4, in Cercospora beticola using GWAS, showing its association with virulence to the resistance gene BvCR4.

bioRxiv · Jun 11, 2023 · PreprintEvolutionary Biology

Genetic diversity and population structure of Epichloe fungal pathogens of plants in natural ecosystems

A. D. Treindl, J. Stapley, A. Leuchtmann

This study examines genetic diversity and population structure of two sympatric Epichloe fungal pathogens in natural ecosystems, finding differences in genetic differentiation and gene flow between species.

bioRxiv · Jan 30, 2023 · PreprintEvolutionary Biology