Author

J. Vines

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Cell Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Research Focus:clustering· 2 Approach:deep learning· 2 Approach:experimental assay· 2 Assay:long-read sequencing· 2 Research Focus:differential expression· 1 Organism:Drosophila· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

A. Cusco· 3 shared O. Francino· 3 shared A. Perez de Rozas· 1 shared A. Sanchez· 1 shared C. Catozzi· 1 shared D. H. Murray· 1 shared D. Perez· 1 shared D. Strutt· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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3 shared papersMicrobiology

A. Cusco

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Recombinant biosensors for multiplex and super-resolution imaging of phosphoinositides

H. Maib, P. Adarska, R. Hunton, J. Vines, D. Strutt, F. Bottanelli, D. H. Murray

This paper introduces recombinant biosensors with SNAP tags for multiplex and super-resolution imaging of all 8 phosphoinositides in fixed cells and tissues.

bioRxiv · Oct 18, 2023Cell Biology

Novel canine high-quality metagenome-assembled genomes, prophages, and host-associated plasmids by long-read metagenomics together with Hi-C proximity ligation

A. Cusco, D. Perez, J. Vines, N. Fabregas, O. Francino

This study uses long-read metagenomics and Hi-C to assemble high-quality canine MAGs and identify prophages and plasmids.

bioRxiv · Jul 2, 2021 · PreprintMicrobiology

Applying Nanopore sequencing to a One-Health scenario for colistin resistance transmission among pigs, cows and the farmer

J. Vines, A. Cusco, S. Napp, J. Gonzalez, A. Perez de Rozas, O. Francino, L. Migura-Garcia

This study uses Nanopore sequencing to analyze colistin resistance genes and other antibiotic resistance genes in pigs, cows, and farmers, identifying genetic contexts and transmission risks.

bioRxiv · Dec 20, 2019 · PreprintMicrobiology

Microbiota profiling with long amplicons using Nanopore sequencing: full-length 16S rRNA gene and whole rrn operon

A. Cusco, C. Catozzi, J. Vines, A. Sanchez, O. Francino

This study evaluates long-amplicon PCR-based approaches using Nanopore sequencing for microbiota profiling at genus and species levels, finding that the rrn operon provides higher resolution than full-length 16S rRNA.

bioRxiv · Oct 24, 2018Microbiology