Author

James T Elder

University of Michigan

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:Hi-C· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Gideon ShakediD· 1 shared Haihan ZhangiD· 1 shared Jiayu ZhouiD· 1 shared Johann Eli GudjonssoniD· 1 shared Lam C. TsoiiD· 1 shared Matthew T. PatrickiD· 1 shared Zhaolin ZhangiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Gideon ShakedORCID

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1 paper

Recent·Most cited

Loopsim: Enrichment Analysis of ChromosomeConformation Capture with Fast EmpiricalDistribution Simulation

Gideon Shaked, Haihan Zhang, Zhaolin Zhang, Jiayu Zhou, Johann Eli Gudjonsson, James T Elder, Matthew T. Patrick, Lam C. Tsoi

Loopsim performs enrichment analysis on Hi-C loop profiles by simulating empirical null distributions to assess statistical significance of loop features.

NAR Genomics and Bioinformatics · Jul 4, 2025Peer-reviewedBioinformatics