MicrobiologybioRxiv
Modeling time-series data from microbial communities
Benjamin J Ridenhour, Sarah L Brooker, Janet E Williams…·Christopher H Remien
The paper introduces a Poisson regression method with elastic-net penalty to infer ecological interactions from microbial time-series data, applied to gut microbiome data from woodrats.
DOI 10.1038/ismej.2017.107