Author

Jan Korbel

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:variant calling· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

Adrian M Stütz· 1 shared and the PCAWG Network· 1 shared Botond Sipos· 1 shared Ekta KhuranaiD· 1 shared Greg Slodkowicz· 1 shared Jeremiah A WalaiD· 1 shared Joachim WeischenfeldtiD· 1 shared Marcin ImielinskiiD· 1 shared

Activity by Year

2016-2017 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperMolecular Biology

Adrian M Stütz

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2 papers

Recent·Most cited

Patterns of structural variation in human cancer

Yilong Li, Nicola D Roberts, Joachim Weischenfeldt, Jeremiah A Wala, Ofer Shapira, Steven E. Schumacher, Ekta Khurana, Jan Korbel, Marcin Imielinski, Rameen Beroukhim, Peter J Campbell, on behalf of the PCAWG-Structural Variation Working Group, and the PCAWG Network

The paper identifies nine structural variation signatures in cancer genomes, revealing patterns of deletions, tandem duplications, and translocations linked to replication mechanisms and oncogenic activation.

bioRxiv · Aug 27, 2017 · PreprintCancer Biology

PASP - a whole-transcriptome poly(A) tail length determination assay for the Illumina platform

Botond Sipos, Adrian M Stütz, Greg Slodkowicz, Tim Massingham, Jan Korbel, Nick Goldman

PASP measures poly(A) tail lengths across the transcriptome using Illumina sequencing, showing reliable results in yeast with potential for broader application.

bioRxiv · Jun 21, 2016 · PreprintMolecular Biology